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Published Workflows | peterli | Detecting genetic diversity in populations using Smilefinder

Galaxy Workflow ' Detecting genetic diversity in populations using Smilefinder'

StepAnnotation
Step 1: Select populations
Specify
BiakaPygmy
MbutiPygmy
Step 2: Count
Output dataset 'pops' from step 1
Step 3: Filter
Output dataset 'output' from step 2
c2!='M' and c2!='X' and c2!='Y'
1
Step 4: Select first
1
Output dataset 'out_file1' from step 3
Step 5: Remove beginning
1
Output dataset 'out_file1' from step 3
Step 6: Sort
Output dataset 'out_file1' from step 5
2 (value not yet validated)
Alphabetical sort
Ascending order
Column selections
Column selection 1
3 (value not yet validated)
Alphabetical sort
Ascending order
Step 7: Concatenate datasets
Output dataset 'out_file1' from step 4
Datasets
Dataset 1
Output dataset 'out_file1' from step 6
Step 8: SmileFinder
Output dataset 'out_file1' from step 7
30
11
10000
0.01
Step 9: grapher
Output dataset 'SmileFinderCompleteReport' from step 8
CUL5
11
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107384618
107483698